Family Health Unit
- Safe Motherhood Program
- National Immunization Program (NIP)
- Newborn Screening Program (NBS)
- Chill Injury Prevention Program (CCIP)
- Adolescent Health and Development Program (AHDP)
Field Implementation and Management Unit (FIMU)
- Regional Epidemiology Surveillance Unit (RESU)
- National Voluntary Blood Services Program (NVBSP)
- Integrated Monitoring and Evaluation Unit (M&E)
- Local Health System Program (LHS)
- Field Health Services Information System (FHIS)
- Disaster Risk Reduction & Management in Health (DRRMH)
- Barangay Health Workers (BHW)
- Botika ng Bayan (PHARMA)
- Health Leadership and Governance Program (HLGP)
- Universal Health Care (UHC)
Infectious Diseases
- National Aedes-Borne Viral Disease Prevention and Control Program
- National Leprosy Control Program
- Malaria Control and Elimination Program
- STI-HIV/AIDS
- National Rabies Prevention and Control Program
- Integrated Helminth Control Program
- National Filariasis Elimination Program
- Food and Water Borne Disease ProgramFood and Water Borne Disease Program
Non-Communicable Diseases
- Health and Productive Aging Program
- Lifestyle Related Diseases (Hypertension, Diabetes Mellitus, Caner)
- Violence and Injury Prevention Program
- Substance Abuse Prevention Program
- Health and Wellness Program for Persons with Disability
- National Mental Health ProgramNational Mental Health Program
Special Concern
- Oral Health Program
- Research and Development
- Nutrition Program
- Health In Tourism Program (HIT)
- Health Facility Operation and Development Unit (HFODU)
- Environmental and Occupational Health Program
- Breastfeeding Program
- Health Care Financing (MAIP)
Management Support Division (MSD)
Service Delivery Network (SDN)
